Source code for mealpy.bio_based.SOA

#!/usr/bin/env python
# Created by "Thieu" at 17:21, 21/05/2022 ----------%                                                                               
#       Email: nguyenthieu2102@gmail.com            %                                                    
#       Github: https://github.com/thieu1995        %                         
# --------------------------------------------------%

import numpy as np
from mealpy.optimizer import Optimizer


[docs]class DevSOA(Optimizer): """ The developed version: Seagull Optimization Algorithm (SOA) Links: 1. https://www.sciencedirect.com/science/article/abs/pii/S0950705118305768 Notes: 1. The original one will not work because their operators always make the solution out of bound. 2. I added the normal random number in Eq. 14 to make its work 3. Besides, I will check keep the better one and remove the worst Hyper-parameters should fine-tune in approximate range to get faster convergence toward the global optimum: + fc (float): [1.0, 10.0] -> better [1, 5], freequency of employing variable A (A linear decreased from fc to 0), default = 2 Examples ~~~~~~~~ >>> import numpy as np >>> from mealpy import FloatVar, SOA >>> >>> def objective_function(solution): >>> return np.sum(solution**2) >>> >>> problem_dict = { >>> "bounds": FloatVar(n_vars=30, lb=(-10.,) * 30, ub=(10.,) * 30, name="delta"), >>> "minmax": "min", >>> "obj_func": objective_function >>> } >>> >>> model = SOA.DevSOA(epoch=1000, pop_size=50, fc = 2) >>> g_best = model.solve(problem_dict) >>> print(f"Solution: {g_best.solution}, Fitness: {g_best.target.fitness}") >>> print(f"Solution: {model.g_best.solution}, Fitness: {model.g_best.target.fitness}") """ def __init__(self, epoch=10000, pop_size=100, fc=2, **kwargs): super().__init__(**kwargs) self.epoch = self.validator.check_int("epoch", epoch, [1, 100000]) self.pop_size = self.validator.check_int("pop_size", pop_size, [5, 10000]) self.fc = self.validator.check_float("fc", fc, [1.0, 10.]) self.set_parameters(["epoch", "pop_size", "fc"]) self.sort_flag = False
[docs] def evolve(self, epoch): """ The main operations (equations) of algorithm. Inherit from Optimizer class Args: epoch (int): The current iteration """ A = self.fc - epoch*self.fc / self.epoch # Eq. 6 uu = vv = 1 pop_new = [] for idx in range(0, self.pop_size): B = 2 * A**2 * self.generator.random() # Eq. 8 M = B * (self.g_best.solution - self.pop[idx].solution) # Eq. 7 C = A * self.pop[idx].solution # Eq. 5 D = np.abs(C + M) # Eq. 9 k = self.generator.uniform(0, 2*np.pi) r = uu * np.exp(k*vv) xx = r * np.cos(k) yy = r * np.sin(k) zz = r * k pos_new = xx * yy * zz * D + self.generator.normal(0, 1) * self.g_best.solution # Eq. 14 pos_new = self.correct_solution(pos_new) agent = self.generate_empty_agent(pos_new) pop_new.append(agent) if self.mode not in self.AVAILABLE_MODES: agent.target = self.get_target(pos_new) self.pop[idx] = self.get_better_agent(agent, self.pop[idx], self.problem.minmax) if self.mode in self.AVAILABLE_MODES: pop_new = self.update_target_for_population(pop_new) self.pop = self.greedy_selection_population(self.pop, pop_new, self.problem.minmax)
[docs]class OriginalSOA(Optimizer): """ The original version: Seagull Optimization Algorithm (SOA) Links: 1. https://www.sciencedirect.com/science/article/abs/pii/S0950705118305768 Hyper-parameters should fine-tune in approximate range to get faster convergence toward the global optimum: + fc (float): [1.0, 10.0] -> better [1, 5], freequency of employing variable A (A linear decreased from fc to 0), default = 2 Examples ~~~~~~~~ >>> import numpy as np >>> from mealpy import FloatVar, SOA >>> >>> def objective_function(solution): >>> return np.sum(solution**2) >>> >>> problem_dict = { >>> "bounds": FloatVar(n_vars=30, lb=(-10.,) * 30, ub=(10.,) * 30, name="delta"), >>> "minmax": "min", >>> "obj_func": objective_function >>> } >>> >>> model = SOA.OriginalSOA(epoch=1000, pop_size=50, fc = 2) >>> g_best = model.solve(problem_dict) >>> print(f"Solution: {g_best.solution}, Fitness: {g_best.target.fitness}") >>> print(f"Solution: {model.g_best.solution}, Fitness: {model.g_best.target.fitness}") References ~~~~~~~~~~ [1] Dhiman, G., & Kumar, V. (2019). Seagull optimization algorithm: Theory and its applications for large-scale industrial engineering problems. Knowledge-based systems, 165, 169-196. """ def __init__(self, epoch=10000, pop_size=100, fc=2, **kwargs): super().__init__(**kwargs) self.epoch = self.validator.check_int("epoch", epoch, [1, 100000]) self.pop_size = self.validator.check_int("pop_size", pop_size, [5, 10000]) self.fc = self.validator.check_float("fc", fc, [1.0, 10.]) self.set_parameters(["epoch", "pop_size", "fc"]) self.sort_flag = False
[docs] def evolve(self, epoch): """ The main operations (equations) of algorithm. Inherit from Optimizer class Args: epoch (int): The current iteration """ A = self.fc - epoch*self.fc / self.epoch # Eq. 6 uu = vv = 1 pop_new = [] for idx in range(0, self.pop_size): B = 2 * A**2 * self.generator.random() # Eq. 8 M = B * (self.g_best.solution - self.pop[idx].solution) # Eq. 7 C = A * self.pop[idx].solution # Eq. 5 D = np.abs(C + M) # Eq. 9 k = self.generator.uniform(0, 2*np.pi) r = uu * np.exp(k*vv) xx = r * np.cos(k) yy = r * np.sin(k) zz = r * k pos_new = xx * yy * zz * D + self.g_best.solution # Eq. 14 pos_new = self.correct_solution(pos_new) agent = self.generate_empty_agent(pos_new) pop_new.append(agent) if self.mode not in self.AVAILABLE_MODES: pop_new[-1].target = self.get_target(pos_new) self.pop = self.update_target_for_population(pop_new)